Council of Elrond

Automatic-attacks (2): Maia - 1 strike with 13 prowess; Maia - 1 strike with 13 prowess.
Special: If the Wizard card Radagast is in play, the automatic-attacks are removed.

Does this apply if the Fallen Wizard card Radagast is in play?

Yes. FW are considered wizards. Cards like Bane of the Ithil Stone affect them too.

Although there is some difference between wizard and wizard card likwise between site and site card. Action from Foul Fumes may tap site in , so may tap Morannon, but Morannon is not site card, so if removed from active play, it is not returned to the location deck.